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chore: deployment startup ordering #108

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8231171
add startup gate for paperdebugger to wait for xtramcp
4ndrelim Jan 28, 2026
ff90ffe
fix: remove dummy defaults to allow backend handling
4ndrelim Jan 28, 2026
4b8f3b9
replace port readiness check with app readiness
4ndrelim Feb 1, 2026
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20 changes: 11 additions & 9 deletions hack/dev.sh
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Expand Up @@ -6,20 +6,21 @@ ROOT_DIR=$(cd -- "$(dirname -- "${BASH_SOURCE[0]}")/.." &>/dev/null && pwd)
cd $ROOT_DIR

OPENAI_BASE_URL=${OPENAI_BASE_URL:-https://api.openai.com/v1}
OPENAI_API_KEY=${OPENAI_API_KEY:-sk-dummy-OPENAI_API_KEY}
OPENAI_API_KEY=${OPENAI_API_KEY:-}
INFERENCE_BASE_URL=${INFERENCE_BASE_URL:-https://inference.paperdebugger.workers.dev}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-sk-dummy-OPEN-ROUTER}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-}
MCP_BASIC_KEY=${MCP_BASIC_KEY:-sk-dummy-MCP_BASIC_KEY}
MCP_PAPERSCORE_KEY=${MCP_PAPERSCORE_KEY:-sk-dummy-MCP_PAPERSCORE_KEY}
XTRAMCP_OPENAI_BASE_URL=${XTRAMCP_OPENAI_BASE_URL:-https://api.openai.com/v1}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-sk-dummy-XTRAMCP_OPENAI_API_KEY}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-}
XTRAMCP_OPENREVIEW_BASE_URL=${XTRAMCP_OPENREVIEW_BASE_URL:-https://api2.openreview.net}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-dummy-XTRAMCP_OPENREVIEW_USERNAME}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-dummy-XTRAMCP_OPENREVIEW_PASSWORD}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-dummy-crossref-email-address}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-dummy-doi-email-address}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-postgresql://dummy-arxiv-metadata-db-url}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-mongodb://dummy-mongo-uri}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-}
XTRAMCP_ACL_METADATA_DB_URL=${XTRAMCP_ACL_METADATA_DB_URL:-}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-}
PAPERDEBUGGER_IMAGE=${PAPERDEBUGGER_IMAGE:-ghcr.io/paperdebugger/sharelatex-paperdebugger:latest}
MONGO_URI=${MONGO_URI:-}
GHCR_DOCKER_CONFIG=${GHCR_DOCKER_CONFIG:-dummy-ghcr-docker-config}
Expand All @@ -42,6 +43,7 @@ helm template $ROOT_DIR/helm-chart \
--set-string xtramcp_openreview_password=$XTRAMCP_OPENREVIEW_PASSWORD \
--set-string xtramcp_crossref_email_address=$XTRAMCP_CROSSREF_EMAIL_ADDRESS \
--set-string xtramcp_doi_email_address=$XTRAMCP_DOI_EMAIL_ADDRESS \
--set-string xtramcp_acl_metadata_db_url=$XTRAMCP_ACL_METADATA_DB_URL \
--set-string xtramcp_arxiv_metadata_db_url=$XTRAMCP_ARXIV_METADATA_DB_URL \
--set-string xtramcp_mongo_uri=$XTRAMCP_MONGO_URI \
--set-string paperdebugger.image=$PAPERDEBUGGER_IMAGE \
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18 changes: 9 additions & 9 deletions hack/prd.sh
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Expand Up @@ -8,19 +8,19 @@ cd $ROOT_DIR
OPENAI_BASE_URL=${OPENAI_BASE_URL:-https://api.openai.com/v1}
OPENAI_API_KEY=${OPENAI_API_KEY:-}
INFERENCE_BASE_URL=${INFERENCE_BASE_URL:-https://inference.paperdebugger.workers.dev}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-sk-dummy-OPEN-ROUTER}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-}
MCP_BASIC_KEY=${MCP_BASIC_KEY:-sk-dummy-MCP_BASIC_KEY}
MCP_PAPERSCORE_KEY=${MCP_PAPERSCORE_KEY:-sk-dummy-MCP_PAPERSCORE_KEY}
XTRAMCP_OPENAI_BASE_URL=${XTRAMCP_OPENAI_BASE_URL:-https://api.openai.com/v1}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-sk-dummy-XTRAMCP_OPENAI_API_KEY}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-}
XTRAMCP_OPENREVIEW_BASE_URL=${XTRAMCP_OPENREVIEW_BASE_URL:-https://api2.openreview.net}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-dummy-XTRAMCP_OPENREVIEW_USERNAME}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-dummy-XTRAMCP_OPENREVIEW_PASSWORD}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-dummy-crossref-email-address}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-dummy-doi-email-address}
XTRAMCP_ACL_METADATA_DB_URL=${XTRAMCP_ACL_METADATA_DB_URL:-postgresql://dummy-acl-metadata-db-url}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-postgresql://dummy-arxiv-metadata-db-url}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-mongodb://dummy-mongo-uri}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-}
XTRAMCP_ACL_METADATA_DB_URL=${XTRAMCP_ACL_METADATA_DB_URL:-}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-}
PAPERDEBUGGER_IMAGE=${PAPERDEBUGGER_IMAGE:-ghcr.io/paperdebugger/sharelatex-paperdebugger:latest}
MONGO_URI=${MONGO_URI:-}
GHCR_DOCKER_CONFIG=${GHCR_DOCKER_CONFIG:-dummy-ghcr-docker-config}
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18 changes: 9 additions & 9 deletions hack/stg.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -8,19 +8,19 @@ cd $ROOT_DIR
OPENAI_BASE_URL=${OPENAI_BASE_URL:-https://api.openai.com/v1}
OPENAI_API_KEY=${OPENAI_API_KEY:-}
INFERENCE_BASE_URL=${INFERENCE_BASE_URL:-https://inference.paperdebugger.workers.dev}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-sk-dummy-OPEN-ROUTER}
INFERENCE_API_KEY=${INFERENCE_API_KEY:-}
MCP_BASIC_KEY=${MCP_BASIC_KEY:-sk-dummy-MCP_BASIC_KEY}
MCP_PAPERSCORE_KEY=${MCP_PAPERSCORE_KEY:-sk-dummy-MCP_PAPERSCORE_KEY}
XTRAMCP_OPENAI_BASE_URL=${XTRAMCP_OPENAI_BASE_URL:-https://api.openai.com/v1}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-sk-dummy-XTRAMCP_OPENAI_API_KEY}
XTRAMCP_OPENAI_API_KEY=${XTRAMCP_OPENAI_API_KEY:-}
XTRAMCP_OPENREVIEW_BASE_URL=${XTRAMCP_OPENREVIEW_BASE_URL:-https://api2.openreview.net}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-dummy-XTRAMCP_OPENREVIEW_USERNAME}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-dummy-XTRAMCP_OPENREVIEW_PASSWORD}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-dummy-crossref-email-address}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-dummy-doi-email-address}
XTRAMCP_ACL_METADATA_DB_URL=${XTRAMCP_ACL_METADATA_DB_URL:-postgresql://dummy-acl-metadata-db-url}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-postgresql://dummy-arxiv-metadata-db-url}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-mongodb://dummy-mongo-uri}
XTRAMCP_OPENREVIEW_USERNAME=${XTRAMCP_OPENREVIEW_USERNAME:-}
XTRAMCP_OPENREVIEW_PASSWORD=${XTRAMCP_OPENREVIEW_PASSWORD:-}
XTRAMCP_CROSSREF_EMAIL_ADDRESS=${XTRAMCP_CROSSREF_EMAIL_ADDRESS:-}
XTRAMCP_DOI_EMAIL_ADDRESS=${XTRAMCP_DOI_EMAIL_ADDRESS:-}
XTRAMCP_ACL_METADATA_DB_URL=${XTRAMCP_ACL_METADATA_DB_URL:-}
XTRAMCP_ARXIV_METADATA_DB_URL=${XTRAMCP_ARXIV_METADATA_DB_URL:-}
XTRAMCP_MONGO_URI=${XTRAMCP_MONGO_URI:-}
PAPERDEBUGGER_IMAGE=${PAPERDEBUGGER_IMAGE:-ghcr.io/paperdebugger/sharelatex-paperdebugger:latest}
MONGO_URI=${MONGO_URI:-}
GHCR_DOCKER_CONFIG=${GHCR_DOCKER_CONFIG:-dummy-ghcr-docker-config}
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14 changes: 12 additions & 2 deletions helm-chart/templates/paperdebugger.yaml
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Expand Up @@ -15,8 +15,8 @@ spec:
spec:
imagePullSecrets:
- name: ghcr-secret
{{ if .Values.mongo.in_cluster }}
initContainers:
{{- if .Values.mongo.in_cluster }}
- name: init-mongodb
image: mongo:latest
command:
Expand All @@ -26,7 +26,17 @@ spec:
"--eval",
'db.isMaster().primary || rs.initiate({_id: "in-cluster", members: [{_id: 0, host: "mongo:27017"}]})',
]
{{ end }}
{{- end }}
- name: wait-for-xtramcp-port
image: busybox:1.36
command: ["sh", "-c"]
args:
- |
echo "Waiting for xtramcp health endpoint..."
until wget -q --spider http://paperdebugger-xtramcp-server:8080/health; do
sleep 2
done
echo "xtramcp is healthy."
containers:
- name: paperdebugger
image: {{ .Values.paperdebugger.image }}
Expand Down