Fix some documentation links

[sbryngelson]

User description

Fixes some broken links in the documentation.

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PR Type

Documentation

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Description

• Fix broken documentation links and references

• Remove invalid YouTube video link

• Clean up formatting and text flow

• Update reference formatting in examples

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File Walkthrough

	Relevant files
Formatting	case.md Improve text formatting and flow                                                  docs/documentation/case.md Improved text flow by removing line break Fixed formatting of tutorial script reference +1/-2
Documentation	getting-started.md Remove broken Aptitude link                                                            docs/documentation/getting-started.md Removed broken Aptitude link Simplified reference to plain text +1/-1      README.md Remove broken YouTube video link                                                  examples/2D_lid_driven_cavity/README.md Removed invalid YouTube video link Cleaned up reference section +0/-2      README.md Fix broken DOI reference link                                                        examples/nD_perfect_reactor/README.md Removed broken DOI link from reference Kept citation text intact +1/-1      README.md Remove broken case.py link                                                              examples/scaling/README.md Removed broken markdown link to case.py Simplified reference to plain text +1/-1

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[Copilot]

Pull Request Overview

This PR fixes broken documentation links across several README and documentation files. The changes remove invalid or malformed links while preserving the essential content and references.

Key Changes:

• Removed broken markdown links that referenced non-existent files
• Cleaned up malformed URLs and link formatting
• Consolidated multi-line text that was incorrectly split

Reviewed Changes

Copilot reviewed 5 out of 5 changed files in this pull request and generated no comments.

Show a summary per file

File	Description
examples/scaling/README.md	Removed broken markdown link to case.py while keeping descriptive text
examples/nD_perfect_reactor/README.md	Removed malformed URL from academic reference
examples/2D_lid_driven_cavity/README.md	Removed broken YouTube video link
docs/documentation/getting-started.md	Removed broken markdown link to Aptitude wiki
docs/documentation/case.md	Consolidated split sentence and improved readability

[qodo-code-review]

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⏱️ Estimated effort to review: 1 🔵⚪⚪⚪⚪

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🔒 No security concerns identified

⚡ No major issues detected

[qodo-code-review]

PR Code Suggestions ✨

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Category	Suggestion	Impact
General	Fix inconsistent directory case naming The directory name in the URL path doesn't match the text reference. The text mentions "3d_sphbubcollapse" but the URL uses "3D_sphbubcollapse" with uppercase "3D". docs/documentation/case.md [4] -can also be found in [examples/3d_sphbubcollapse/](https://github.com/MFlowCode/MFC/blob/master/examples/3D_sphbubcollapse/case.py). +can also be found in [examples/3d_sphbubcollapse/](https://github.com/MFlowCode/MFC/blob/master/examples/3d_sphbubcollapse/case.py). Suggestion importance[1-10]: 4 __ Why: The suggestion correctly identifies a case inconsistency between the link text and the URL path, which is a minor quality issue; however, the proposed fix of changing the URL is arguably less correct than changing the text to match the actual directory name in the repository.	Low
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